#include <cstring>
#include <sstream>

#include "vtr_assert.h"
#include "vtr_memory.h"
#include "vtr_util.h"

#include "arch_types.h"
#include "arch_util.h"
#include "arch_error.h"


#include "read_xml_arch_file.h"
#include "read_xml_util.h"

static void free_all_pb_graph_nodes(t_type_descriptor* type_descriptors, int num_type_descriptors);
static void free_pb_graph(t_pb_graph_node *pb_graph_node);
static void free_pb_type(t_pb_type *pb_type);


InstPort::InstPort(std::string str) {
    std::vector<std::string> inst_port = vtr::split(str, ".");

    if(inst_port.size() == 1) {
        instance_ = name_index();
        port_ = parse_name_index(inst_port[0]);

    } else if(inst_port.size() == 2) {
        instance_ = parse_name_index(inst_port[0]);
        port_ = parse_name_index(inst_port[1]);
    } else {
        std::string msg = vtr::string_fmt("Failed to parse instance port specification '%s'",
                                str.c_str());
        throw ArchFpgaError(msg);
    }
}

InstPort::name_index InstPort::parse_name_index(std::string str) {
    auto open_bracket_pos = str.find("["); 
    auto close_bracket_pos = str.find("]"); 
    auto colon_pos = str.find(":"); 

    //Parse checks
    if(open_bracket_pos == std::string::npos && close_bracket_pos != std::string::npos) {
        //Close brace only
        std::string msg = "near '" + str + "', missing '['";
        throw ArchFpgaError(msg);
    }

    if(open_bracket_pos != std::string::npos && close_bracket_pos == std::string::npos) {
        //Open brace only
        std::string msg = "near '" + str + "', missing ']'";
        throw ArchFpgaError(msg);
    }

    if(open_bracket_pos != std::string::npos && close_bracket_pos != std::string::npos) {
        //Have open and close braces, close must be after open
        if(open_bracket_pos > close_bracket_pos) {
            std::string msg = "near '" + str + "', '[' after ']'";
            throw ArchFpgaError(msg);
        }
    }

    if(colon_pos != std::string::npos) {
        //Have a colon, it must be between open/close braces
        if(colon_pos > close_bracket_pos || colon_pos < open_bracket_pos) {
            std::string msg = "near '" + str + "', found ':' but not between '[' and ']'";
            throw ArchFpgaError(msg);
        }
    }


    //Extract the name and index info
    std::string name = str.substr(0,open_bracket_pos);
    std::string first_idx_str;
    std::string second_idx_str;

    if(colon_pos == std::string::npos && open_bracket_pos == std::string::npos && close_bracket_pos == std::string::npos) {
    } else if(colon_pos == std::string::npos) {
        //No colon, implies a single element
        first_idx_str = str.substr(open_bracket_pos + 1, close_bracket_pos);
        second_idx_str = first_idx_str;
    } else {
        //Colon, implies a range
        first_idx_str = str.substr(open_bracket_pos + 1, colon_pos);
        second_idx_str = str.substr(colon_pos + 1, close_bracket_pos);
    }

    int first_idx = UNSPECIFIED;
    if(!first_idx_str.empty()) {
        std::stringstream ss(first_idx_str);
        size_t idx;
        ss >> idx;
        if(!ss.good()) {
            std::string msg = "near '" + str + "', expected positive integer";
            throw ArchFpgaError(msg);
        }
        first_idx = idx;
    }

    int second_idx = UNSPECIFIED;
    if(!second_idx_str.empty()) {
        std::stringstream ss(second_idx_str);
        size_t idx;
        ss >> idx;
        if(!ss.good()) {
            std::string msg = "near '" + str + "', expected positive integer";
            throw ArchFpgaError(msg);
        }
        second_idx = idx;
    }

    name_index value;
    value.name = name;
    value.low_idx = std::min(first_idx, second_idx);
    value.high_idx = std::max(first_idx, second_idx);
    return value;
}

int InstPort::num_instances() const {
    if (instance_high_index() == UNSPECIFIED || instance_low_index() == UNSPECIFIED) {
        throw ArchFpgaError("Unspecified instance indicies");
    }
    return instance_high_index() - instance_low_index() + 1;
}

int InstPort::num_pins() const {
    if (port_high_index() == UNSPECIFIED || port_low_index() == UNSPECIFIED) {
        throw ArchFpgaError("Unspecified port indicies");
    }
    return port_high_index() - port_low_index() + 1;
}


void free_arch(t_arch* arch) {
    if (arch == nullptr) {
        return;
    }

    for (int i = 0; i < arch->num_switches; ++i) {
        if (arch->Switches->name != nullptr) {
            vtr::free(arch->Switches[i].name);
        }
    }
    delete[] arch->Switches;
    arch->Switches = nullptr;
    t_model *model = arch->models;
    while (model) {
        t_model_ports *input_port = model->inputs;
        while (input_port) {
            t_model_ports *prev_port = input_port;
            input_port = input_port->next;
            vtr::free(prev_port->name);
            delete prev_port;
        }
        t_model_ports *output_port = model->outputs;
        while (output_port) {
            t_model_ports *prev_port = output_port;
            output_port = output_port->next;
            vtr::free(prev_port->name);
            delete prev_port;
        }
        vtr::t_linked_vptr *vptr = model->pb_types;
        while (vptr) {
            vtr::t_linked_vptr *vptr_prev = vptr;
            vptr = vptr->next;
            vtr::free(vptr_prev);
        }
        t_model *prev_model = model;

        model = model->next;
        if (prev_model->instances)
            vtr::free(prev_model->instances);
        vtr::free(prev_model->name);
        delete prev_model;
    }

    for (int i = 0; i < arch->num_directs; ++i) {
        vtr::free(arch->Directs[i].name);
        vtr::free(arch->Directs[i].from_pin);
        vtr::free(arch->Directs[i].to_pin);
    }
    vtr::free(arch->Directs);

    vtr::free(arch->architecture_id);

    if (arch->model_library) {
        for (int i = 0; i < 4; ++i) {
            vtr::t_linked_vptr *vptr = arch->model_library[i].pb_types;
            while (vptr) {
                vtr::t_linked_vptr *vptr_prev = vptr;
                vptr = vptr->next;
                vtr::free(vptr_prev);
            }
        }

        vtr::free(arch->model_library[0].name);
        vtr::free(arch->model_library[0].outputs->name);
        delete[] arch->model_library[0].outputs;
        vtr::free(arch->model_library[1].inputs->name);
        delete[] arch->model_library[1].inputs;
        vtr::free(arch->model_library[1].name);
        vtr::free(arch->model_library[2].name);
        vtr::free(arch->model_library[2].inputs[0].name);
        vtr::free(arch->model_library[2].inputs[1].name);
        delete[] arch->model_library[2].inputs;
        vtr::free(arch->model_library[2].outputs->name);
        delete[] arch->model_library[2].outputs;
        vtr::free(arch->model_library[3].name);
        vtr::free(arch->model_library[3].inputs->name);
        delete[] arch->model_library[3].inputs;
        vtr::free(arch->model_library[3].outputs->name);
        delete[] arch->model_library[3].outputs;
        delete[] arch->model_library;
    }

    if (arch->clocks) {
        vtr::free(arch->clocks->clock_inf);
    }
}

void free_type_descriptors(t_type_descriptor* type_descriptors, int num_type_descriptors) {
	free_all_pb_graph_nodes(type_descriptors, num_type_descriptors);

    for (int i = 0; i < num_type_descriptors; ++i) {

        vtr::free(type_descriptors[i].name);
        if (i == EMPTY_TYPE_INDEX) {
            continue;
        }

        for (int width = 0; width < type_descriptors[i].width; ++width) {
            for (int height = 0; height < type_descriptors[i].height; ++height) {
                for (int side = 0; side < 4; ++side) {
                    for (int pin = 0; pin < type_descriptors[i].num_pin_loc_assignments[width][height][side]; ++pin) {
                        if (type_descriptors[i].pin_loc_assignments[width][height][side][pin])
                            vtr::free(type_descriptors[i].pin_loc_assignments[width][height][side][pin]);
                    }
                    vtr::free(type_descriptors[i].pinloc[width][height][side]);
                    vtr::free(type_descriptors[i].pin_loc_assignments[width][height][side]);
                }
                vtr::free(type_descriptors[i].pinloc[width][height]);
                vtr::free(type_descriptors[i].pin_loc_assignments[width][height]);
                vtr::free(type_descriptors[i].num_pin_loc_assignments[width][height]);
            }
            vtr::free(type_descriptors[i].pinloc[width]);
            vtr::free(type_descriptors[i].pin_loc_assignments[width]);
            vtr::free(type_descriptors[i].num_pin_loc_assignments[width]);
        }
        vtr::free(type_descriptors[i].pinloc);
        vtr::free(type_descriptors[i].pin_loc_assignments);
        vtr::free(type_descriptors[i].num_pin_loc_assignments);

        for (int j = 0; j < type_descriptors[i].num_class; ++j) {
            vtr::free(type_descriptors[i].class_inf[j].pinlist);
        }
        vtr::free(type_descriptors[i].class_inf);
        vtr::free(type_descriptors[i].is_ignored_pin);
        vtr::free(type_descriptors[i].is_pin_global);
        vtr::free(type_descriptors[i].pin_class);

        free_pb_type(type_descriptors[i].pb_type);
        delete type_descriptors[i].pb_type;
    }
    delete[] type_descriptors;
}

static void free_all_pb_graph_nodes(t_type_descriptor* type_descriptors, int num_type_descriptors) {
	for (int i = 0; i < num_type_descriptors; i++) {
		if (type_descriptors[i].pb_type) {
			if (type_descriptors[i].pb_graph_head) {
				free_pb_graph(type_descriptors[i].pb_graph_head);
				vtr::free(type_descriptors[i].pb_graph_head);
			}
		}
	}
}

static void free_pb_graph(t_pb_graph_node *pb_graph_node) {

	int i, j, k;
	const t_pb_type *pb_type;

	pb_type = pb_graph_node->pb_type;

	/*free all lists of connectable input pin pointer of pb_graph_node and it's children*/
	/*free_list_of_connectable_input_pin_ptrs (pb_graph_node);*/

	/* Free ports for pb graph node */
	for (i = 0; i < pb_graph_node->num_input_ports; i++) {
		for (j = 0; j < pb_graph_node->num_input_pins[i]; j++) {
			if (pb_graph_node->input_pins[i][j].pin_timing)
				vtr::free(pb_graph_node->input_pins[i][j].pin_timing);
			if (pb_graph_node->input_pins[i][j].pin_timing_del_max)
				vtr::free(pb_graph_node->input_pins[i][j].pin_timing_del_max);
			if (pb_graph_node->input_pins[i][j].pin_timing_del_min)
				vtr::free(pb_graph_node->input_pins[i][j].pin_timing_del_min);
			if (pb_graph_node->input_pins[i][j].input_edges)
				vtr::free(pb_graph_node->input_pins[i][j].input_edges);
			if (pb_graph_node->input_pins[i][j].output_edges)
				vtr::free(pb_graph_node->input_pins[i][j].output_edges);
			if (pb_graph_node->input_pins[i][j].parent_pin_class)
				vtr::free(pb_graph_node->input_pins[i][j].parent_pin_class);
		}
		delete[] pb_graph_node->input_pins[i];
	}
	for (i = 0; i < pb_graph_node->num_output_ports; i++) {
		for (j = 0; j < pb_graph_node->num_output_pins[i]; j++) {
			if (pb_graph_node->output_pins[i][j].pin_timing)
				vtr::free(pb_graph_node->output_pins[i][j].pin_timing);
			if (pb_graph_node->output_pins[i][j].pin_timing_del_max)
				vtr::free(pb_graph_node->output_pins[i][j].pin_timing_del_max);
			if (pb_graph_node->output_pins[i][j].pin_timing_del_min)
				vtr::free(pb_graph_node->output_pins[i][j].pin_timing_del_min);
			if (pb_graph_node->output_pins[i][j].input_edges)
				vtr::free(pb_graph_node->output_pins[i][j].input_edges);
			if (pb_graph_node->output_pins[i][j].output_edges)
				vtr::free(pb_graph_node->output_pins[i][j].output_edges);
			if (pb_graph_node->output_pins[i][j].parent_pin_class)
				vtr::free(pb_graph_node->output_pins[i][j].parent_pin_class);

			if (pb_graph_node->output_pins[i][j].list_of_connectable_input_pin_ptrs) {
				for (k = 0; k < pb_graph_node->pb_type->depth; k++) {
					if (pb_graph_node->output_pins[i][j].list_of_connectable_input_pin_ptrs[k]) {
						vtr::free(
								pb_graph_node->output_pins[i][j].list_of_connectable_input_pin_ptrs[k]);
					}
				}
				vtr::free(
						pb_graph_node->output_pins[i][j].list_of_connectable_input_pin_ptrs);
			}

			if (pb_graph_node->output_pins[i][j].num_connectable_primitive_input_pins)
				vtr::free(
						pb_graph_node->output_pins[i][j].num_connectable_primitive_input_pins);
		}
		delete[] pb_graph_node->output_pins[i];
	}
	for (i = 0; i < pb_graph_node->num_clock_ports; i++) {
		for (j = 0; j < pb_graph_node->num_clock_pins[i]; j++) {
			if (pb_graph_node->clock_pins[i][j].pin_timing)
				vtr::free(pb_graph_node->clock_pins[i][j].pin_timing);
			if (pb_graph_node->clock_pins[i][j].pin_timing_del_max)
				vtr::free(pb_graph_node->clock_pins[i][j].pin_timing_del_max);
			if (pb_graph_node->clock_pins[i][j].pin_timing_del_min)
				vtr::free(pb_graph_node->clock_pins[i][j].pin_timing_del_min);
			if (pb_graph_node->clock_pins[i][j].input_edges)
				vtr::free(pb_graph_node->clock_pins[i][j].input_edges);
			if (pb_graph_node->clock_pins[i][j].output_edges)
				vtr::free(pb_graph_node->clock_pins[i][j].output_edges);
			if (pb_graph_node->clock_pins[i][j].parent_pin_class)
				vtr::free(pb_graph_node->clock_pins[i][j].parent_pin_class);
		}
		delete[] pb_graph_node->clock_pins[i];
	}


	for (i = 0; i < pb_graph_node->pb_type->num_modes; i++) {
		vtr::free(pb_graph_node->interconnect_pins[i]);
	}
	vtr::free(pb_graph_node->interconnect_pins);

	vtr::free(pb_graph_node->input_pins);
	vtr::free(pb_graph_node->output_pins);
	vtr::free(pb_graph_node->clock_pins);

	vtr::free(pb_graph_node->num_input_pins);
	vtr::free(pb_graph_node->num_output_pins);
	vtr::free(pb_graph_node->num_clock_pins);

	vtr::free(pb_graph_node->input_pin_class_size);
	vtr::free(pb_graph_node->output_pin_class_size);

	for (i = 0; i < pb_type->num_modes; i++) {
		for (j = 0; j < pb_type->modes[i].num_pb_type_children; j++) {
			for (k = 0; k < pb_type->modes[i].pb_type_children[j].num_pb; k++) {
				free_pb_graph(&pb_graph_node->child_pb_graph_nodes[i][j][k]);
			}
			vtr::free(pb_graph_node->child_pb_graph_nodes[i][j]);
		}
		vtr::free(pb_graph_node->child_pb_graph_nodes[i]);
	}
	vtr::free(pb_graph_node->child_pb_graph_nodes);
}

static void free_pb_type(t_pb_type *pb_type) {
	vtr::free(pb_type->name);
	if (pb_type->blif_model)
		vtr::free(pb_type->blif_model);

    for (int i = 0; i < pb_type->num_modes; ++i) {
        for (int j = 0; j < pb_type->modes[i].num_pb_type_children; ++j) {
            free_pb_type(&pb_type->modes[i].pb_type_children[j]);
        }
        delete[] pb_type->modes[i].pb_type_children;
        vtr::free(pb_type->modes[i].name);
        for (int j = 0; j < pb_type->modes[i].num_interconnect; ++j) {
            vtr::free(pb_type->modes[i].interconnect[j].input_string);
            vtr::free(pb_type->modes[i].interconnect[j].output_string);
            vtr::free(pb_type->modes[i].interconnect[j].name);

            for (int k = 0; k < pb_type->modes[i].interconnect[j].num_annotations; ++k) {
                if (pb_type->modes[i].interconnect[j].annotations[k].clock)
                    vtr::free(pb_type->modes[i].interconnect[j].annotations[k].clock);
                if (pb_type->modes[i].interconnect[j].annotations[k].input_pins) {
                    vtr::free(pb_type->modes[i].interconnect[j].annotations[k].input_pins);
                }
                if (pb_type->modes[i].interconnect[j].annotations[k].output_pins) {
                    vtr::free(pb_type->modes[i].interconnect[j].annotations[k].output_pins);
                }
                for (int m = 0; m < pb_type->modes[i].interconnect[j].annotations[k].num_value_prop_pairs; ++m) {
                    vtr::free(pb_type->modes[i].interconnect[j].annotations[k].value[m]);
                }
                vtr::free(pb_type->modes[i].interconnect[j].annotations[k].prop);
                vtr::free(pb_type->modes[i].interconnect[j].annotations[k].value);
            }
            vtr::free(pb_type->modes[i].interconnect[j].annotations);
            if (pb_type->modes[i].interconnect[j].interconnect_power)
                vtr::free(pb_type->modes[i].interconnect[j].interconnect_power);
        }
        if (pb_type->modes[i].interconnect)
            delete [] pb_type->modes[i].interconnect;
        if (pb_type->modes[i].mode_power)
            vtr::free(pb_type->modes[i].mode_power);
    }
    if (pb_type->modes)
        delete [] pb_type->modes;

    for (int i = 0; i < pb_type->num_annotations; ++i) {
        for (int j = 0; j < pb_type->annotations[i].num_value_prop_pairs; ++j) {
            vtr::free(pb_type->annotations[i].value[j]);
        }
        vtr::free(pb_type->annotations[i].value);
        vtr::free(pb_type->annotations[i].prop);
        if (pb_type->annotations[i].input_pins) {
            vtr::free(pb_type->annotations[i].input_pins);
        }
        if (pb_type->annotations[i].output_pins) {
            vtr::free(pb_type->annotations[i].output_pins);
        }
        if (pb_type->annotations[i].clock) {
            vtr::free(pb_type->annotations[i].clock);
        }
    }
    if (pb_type->num_annotations > 0) {
        vtr::free(pb_type->annotations);
    }

    if (pb_type->pb_type_power) {
        vtr::free(pb_type->pb_type_power);
    }

    for (int i = 0; i < pb_type->num_ports; ++i) {
        vtr::free(pb_type->ports[i].name);
        if (pb_type->ports[i].port_class) {
            vtr::free(pb_type->ports[i].port_class);
        }
        if (pb_type->ports[i].port_power) {
            vtr::free(pb_type->ports[i].port_power);
        }
    }
    vtr::free(pb_type->ports);
}

t_port * findPortByName(const char * name, t_pb_type * pb_type,
		int * high_index, int * low_index) {
	t_port * port;
	int i;
	unsigned int high;
	unsigned int low;
	unsigned int bracket_pos;
	unsigned int colon_pos;

	bracket_pos = strcspn(name, "[");

	/* Find port by name */
	port = nullptr;
	for (i = 0; i < pb_type->num_ports; i++) {
		char * compare_to = pb_type->ports[i].name;

		if (strlen(compare_to) == bracket_pos
				&& strncmp(name, compare_to, bracket_pos) == 0) {
			port = &pb_type->ports[i];
			break;
		}
	}
	if (i >= pb_type->num_ports) {
		return nullptr;
	}

	/* Get indices */
	if (strlen(name) > bracket_pos) {
		high = atoi(&name[bracket_pos + 1]);

		colon_pos = strcspn(name, ":");

		if (colon_pos < strlen(name)) {
			low = atoi(&name[colon_pos + 1]);
		} else {
			low = high;
		}
	} else {
		high = port->num_pins - 1;
		low = 0;
	}

	if (high_index && low_index) {
		*high_index = high;
		*low_index = low;
	}

	return port;
}

void SetupEmptyType(t_type_descriptor* cb_type_descriptors,
                    t_type_ptr EMPTY_TYPE) {
	t_type_descriptor * type;
	type = &cb_type_descriptors[EMPTY_TYPE->index];
	type->name = vtr::strdup("EMPTY");
	type->num_pins = 0;
	type->width = 1;
	type->height = 1;
	type->capacity = 0;
	type->num_drivers = 0;
	type->num_receivers = 0;
	type->pinloc = nullptr;
	type->num_class = 0;
	type->class_inf = nullptr;
	type->pin_class = nullptr;
	type->is_ignored_pin = nullptr;
	type->pb_type = nullptr;
	type->area = UNDEFINED;
    type->switchblock_locations = vtr::Matrix<e_sb_type>({{size_t(type->width), size_t(type->height)}}, e_sb_type::FULL);
    type->switchblock_switch_overrides = vtr::Matrix<int>({{size_t(type->width), size_t(type->height)}}, DEFAULT_SWITCH);
}

void alloc_and_load_default_child_for_pb_type( t_pb_type *pb_type,
		char *new_name, t_pb_type *copy) {
	int i, j;
	char *dot;

	VTR_ASSERT(pb_type->blif_model != nullptr);

	copy->name = vtr::strdup(new_name);
	copy->blif_model = vtr::strdup(pb_type->blif_model);
	copy->class_type = pb_type->class_type;
	copy->depth = pb_type->depth;
	copy->model = pb_type->model;
	copy->modes = nullptr;
	copy->num_modes = 0;
	copy->num_clock_pins = pb_type->num_clock_pins;
	copy->num_input_pins = pb_type->num_input_pins;
	copy->num_output_pins = pb_type->num_output_pins;
	copy->num_pb = 1;

	/* Power */
	copy->pb_type_power = (t_pb_type_power*) vtr::calloc(1,
			sizeof(t_pb_type_power));
	copy->pb_type_power->estimation_method = power_method_inherited(
			pb_type->pb_type_power->estimation_method);

	/* Ports */
	copy->num_ports = pb_type->num_ports;
	copy->ports = (t_port*) vtr::calloc(pb_type->num_ports, sizeof(t_port));
	for (i = 0; i < pb_type->num_ports; i++) {
		copy->ports[i].is_clock = pb_type->ports[i].is_clock;
		copy->ports[i].model_port = pb_type->ports[i].model_port;
		copy->ports[i].type = pb_type->ports[i].type;
		copy->ports[i].num_pins = pb_type->ports[i].num_pins;
		copy->ports[i].parent_pb_type = copy;
		copy->ports[i].name = vtr::strdup(pb_type->ports[i].name);
		copy->ports[i].port_class = vtr::strdup(pb_type->ports[i].port_class);
		copy->ports[i].port_index_by_type = pb_type->ports[i].port_index_by_type;

		copy->ports[i].port_power = (t_port_power*) vtr::calloc(1,
				sizeof(t_port_power));
		//Defaults
		if (copy->pb_type_power->estimation_method == POWER_METHOD_AUTO_SIZES) {
			copy->ports[i].port_power->wire_type = POWER_WIRE_TYPE_AUTO;
			copy->ports[i].port_power->buffer_type = POWER_BUFFER_TYPE_AUTO;
		} else if (copy->pb_type_power->estimation_method
				== POWER_METHOD_SPECIFY_SIZES) {
			copy->ports[i].port_power->wire_type = POWER_WIRE_TYPE_IGNORED;
			copy->ports[i].port_power->buffer_type = POWER_BUFFER_TYPE_NONE;
		}
	}

	copy->max_internal_delay = pb_type->max_internal_delay;
	copy->annotations = (t_pin_to_pin_annotation*) vtr::calloc(
			pb_type->num_annotations, sizeof(t_pin_to_pin_annotation));
	copy->num_annotations = pb_type->num_annotations;
	for (i = 0; i < copy->num_annotations; i++) {
		copy->annotations[i].clock = vtr::strdup(pb_type->annotations[i].clock);
		dot = strstr(pb_type->annotations[i].input_pins, ".");
		copy->annotations[i].input_pins = (char*) vtr::malloc(
				sizeof(char) * (strlen(new_name) + strlen(dot) + 1));
		copy->annotations[i].input_pins[0] = '\0';
		strcat(copy->annotations[i].input_pins, new_name);
		strcat(copy->annotations[i].input_pins, dot);
		if (pb_type->annotations[i].output_pins != nullptr) {
			dot = strstr(pb_type->annotations[i].output_pins, ".");
			copy->annotations[i].output_pins = (char*) vtr::malloc(
					sizeof(char) * (strlen(new_name) + strlen(dot) + 1));
			copy->annotations[i].output_pins[0] = '\0';
			strcat(copy->annotations[i].output_pins, new_name);
			strcat(copy->annotations[i].output_pins, dot);
		} else {
			copy->annotations[i].output_pins = nullptr;
		}
		copy->annotations[i].line_num = pb_type->annotations[i].line_num;
		copy->annotations[i].format = pb_type->annotations[i].format;
		copy->annotations[i].type = pb_type->annotations[i].type;
		copy->annotations[i].num_value_prop_pairs =
				pb_type->annotations[i].num_value_prop_pairs;
		copy->annotations[i].prop = (int*) vtr::malloc(
				sizeof(int) * pb_type->annotations[i].num_value_prop_pairs);
		copy->annotations[i].value = (char**) vtr::malloc(
				sizeof(char *) * pb_type->annotations[i].num_value_prop_pairs);
		for (j = 0; j < pb_type->annotations[i].num_value_prop_pairs; j++) {
			copy->annotations[i].prop[j] = pb_type->annotations[i].prop[j];
			copy->annotations[i].value[j] = vtr::strdup(
					pb_type->annotations[i].value[j]);
		}
	}

}

/* populate special lut class */
void ProcessLutClass(t_pb_type *lut_pb_type) {
	char *default_name;
	t_port *in_port;
	t_port *out_port;
	int i, j;

	if (strcmp(lut_pb_type->name, "lut") != 0) {
		default_name = vtr::strdup("lut");
	} else {
		default_name = vtr::strdup("lut_child");
	}

	lut_pb_type->num_modes = 2;
	lut_pb_type->pb_type_power->leakage_default_mode = 1;
	lut_pb_type->modes = new t_mode[lut_pb_type->num_modes];

	/* First mode, route_through */
	lut_pb_type->modes[0].name = vtr::strdup("wire");
	lut_pb_type->modes[0].parent_pb_type = lut_pb_type;
	lut_pb_type->modes[0].index = 0;
	lut_pb_type->modes[0].num_pb_type_children = 0;
	lut_pb_type->modes[0].mode_power = (t_mode_power*) vtr::calloc(1,
			sizeof(t_mode_power));

	/* Process interconnect */
	/* TODO: add timing annotations to route-through */
	VTR_ASSERT(lut_pb_type->num_ports == 2);
	if (strcmp(lut_pb_type->ports[0].port_class, "lut_in") == 0) {
		VTR_ASSERT(strcmp(lut_pb_type->ports[1].port_class, "lut_out") == 0);
		in_port = &lut_pb_type->ports[0];
		out_port = &lut_pb_type->ports[1];
	} else {
		VTR_ASSERT(strcmp(lut_pb_type->ports[0].port_class, "lut_out") == 0);
		VTR_ASSERT(strcmp(lut_pb_type->ports[1].port_class, "lut_in") == 0);
		out_port = &lut_pb_type->ports[0];
		in_port = &lut_pb_type->ports[1];
	}
	lut_pb_type->modes[0].num_interconnect = 1;
	lut_pb_type->modes[0].interconnect = new t_interconnect[1];
	lut_pb_type->modes[0].interconnect[0].name = (char*) vtr::calloc(
			strlen(lut_pb_type->name) + 10, sizeof(char));
	sprintf(lut_pb_type->modes[0].interconnect[0].name, "complete:%s",
			lut_pb_type->name);
	lut_pb_type->modes[0].interconnect[0].type = COMPLETE_INTERC;
	lut_pb_type->modes[0].interconnect[0].input_string = (char*) vtr::calloc(
			strlen(lut_pb_type->name) + strlen(in_port->name) + 2,
			sizeof(char));
	sprintf(lut_pb_type->modes[0].interconnect[0].input_string, "%s.%s",
			lut_pb_type->name, in_port->name);
	lut_pb_type->modes[0].interconnect[0].output_string = (char*) vtr::calloc(
			strlen(lut_pb_type->name) + strlen(out_port->name) + 2,
			sizeof(char));
	sprintf(lut_pb_type->modes[0].interconnect[0].output_string, "%s.%s",
			lut_pb_type->name, out_port->name);

	lut_pb_type->modes[0].interconnect[0].parent_mode_index = 0;
	lut_pb_type->modes[0].interconnect[0].parent_mode = &lut_pb_type->modes[0];
	lut_pb_type->modes[0].interconnect[0].interconnect_power =
			(t_interconnect_power*) vtr::calloc(1, sizeof(t_interconnect_power));

	lut_pb_type->modes[0].interconnect[0].annotations =
			(t_pin_to_pin_annotation*) vtr::calloc(lut_pb_type->num_annotations,
					sizeof(t_pin_to_pin_annotation));
	lut_pb_type->modes[0].interconnect[0].num_annotations =
			lut_pb_type->num_annotations;
	for (i = 0; i < lut_pb_type->modes[0].interconnect[0].num_annotations;
			i++) {
		lut_pb_type->modes[0].interconnect[0].annotations[i].clock = vtr::strdup(
				lut_pb_type->annotations[i].clock);
		lut_pb_type->modes[0].interconnect[0].annotations[i].input_pins =
				vtr::strdup(lut_pb_type->annotations[i].input_pins);
		lut_pb_type->modes[0].interconnect[0].annotations[i].output_pins =
				vtr::strdup(lut_pb_type->annotations[i].output_pins);
		lut_pb_type->modes[0].interconnect[0].annotations[i].line_num =
				lut_pb_type->annotations[i].line_num;
		lut_pb_type->modes[0].interconnect[0].annotations[i].format =
				lut_pb_type->annotations[i].format;
		lut_pb_type->modes[0].interconnect[0].annotations[i].type =
				lut_pb_type->annotations[i].type;
		lut_pb_type->modes[0].interconnect[0].annotations[i].num_value_prop_pairs =
				lut_pb_type->annotations[i].num_value_prop_pairs;
		lut_pb_type->modes[0].interconnect[0].annotations[i].prop =
				(int*) vtr::malloc(
						sizeof(int)
								* lut_pb_type->annotations[i].num_value_prop_pairs);
		lut_pb_type->modes[0].interconnect[0].annotations[i].value =
				(char**) vtr::malloc(
						sizeof(char *)
								* lut_pb_type->annotations[i].num_value_prop_pairs);
		for (j = 0; j < lut_pb_type->annotations[i].num_value_prop_pairs; j++) {
			lut_pb_type->modes[0].interconnect[0].annotations[i].prop[j] =
					lut_pb_type->annotations[i].prop[j];
			lut_pb_type->modes[0].interconnect[0].annotations[i].value[j] =
					vtr::strdup(lut_pb_type->annotations[i].value[j]);
		}
	}

	/* Second mode, LUT */

	lut_pb_type->modes[1].name = vtr::strdup(lut_pb_type->name);
	lut_pb_type->modes[1].parent_pb_type = lut_pb_type;
	lut_pb_type->modes[1].index = 1;
	lut_pb_type->modes[1].num_pb_type_children = 1;
	lut_pb_type->modes[1].mode_power = (t_mode_power*) vtr::calloc(1,
			sizeof(t_mode_power));
	lut_pb_type->modes[1].pb_type_children = new t_pb_type[1];
	alloc_and_load_default_child_for_pb_type(lut_pb_type, default_name,
			lut_pb_type->modes[1].pb_type_children);
	/* moved annotations to child so delete old annotations */
	for (i = 0; i < lut_pb_type->num_annotations; i++) {
		for (j = 0; j < lut_pb_type->annotations[i].num_value_prop_pairs; j++) {
			free(lut_pb_type->annotations[i].value[j]);
		}
		free(lut_pb_type->annotations[i].value);
		free(lut_pb_type->annotations[i].prop);
		if (lut_pb_type->annotations[i].input_pins) {
			free(lut_pb_type->annotations[i].input_pins);
		}
		if (lut_pb_type->annotations[i].output_pins) {
			free(lut_pb_type->annotations[i].output_pins);
		}
		if (lut_pb_type->annotations[i].clock) {
			free(lut_pb_type->annotations[i].clock);
		}
	}
	lut_pb_type->num_annotations = 0;
	free(lut_pb_type->annotations);
	lut_pb_type->annotations = nullptr;
	lut_pb_type->modes[1].pb_type_children[0].depth = lut_pb_type->depth + 1;
	lut_pb_type->modes[1].pb_type_children[0].parent_mode = &lut_pb_type->modes[1];
	for (i = 0; i < lut_pb_type->modes[1].pb_type_children[0].num_ports; i++) {
		if (lut_pb_type->modes[1].pb_type_children[0].ports[i].type == IN_PORT) {
			lut_pb_type->modes[1].pb_type_children[0].ports[i].equivalent = PortEquivalence::FULL;
		}
	}

	/* Process interconnect */
	lut_pb_type->modes[1].num_interconnect = 2;
	lut_pb_type->modes[1].interconnect = new t_interconnect[lut_pb_type->modes[1].num_interconnect];
	lut_pb_type->modes[1].interconnect[0].name = (char*) vtr::calloc(
			strlen(lut_pb_type->name) + 10, sizeof(char));
	sprintf(lut_pb_type->modes[1].interconnect[0].name, "direct:%s",
			lut_pb_type->name);
	lut_pb_type->modes[1].interconnect[0].type = DIRECT_INTERC;
	lut_pb_type->modes[1].interconnect[0].input_string = (char*) vtr::calloc(
			strlen(lut_pb_type->name) + strlen(in_port->name) + 2,
			sizeof(char));
	sprintf(lut_pb_type->modes[1].interconnect[0].input_string, "%s.%s",
			lut_pb_type->name, in_port->name);
	lut_pb_type->modes[1].interconnect[0].output_string = (char*) vtr::calloc(
			strlen(default_name) + strlen(in_port->name) + 2, sizeof(char));
	sprintf(lut_pb_type->modes[1].interconnect[0].output_string, "%s.%s",
			default_name, in_port->name);
	lut_pb_type->modes[1].interconnect[0].infer_annotations = true;

	lut_pb_type->modes[1].interconnect[0].parent_mode_index = 1;
	lut_pb_type->modes[1].interconnect[0].parent_mode = &lut_pb_type->modes[1];
	lut_pb_type->modes[1].interconnect[0].interconnect_power =
			(t_interconnect_power*) vtr::calloc(1, sizeof(t_interconnect_power));

	lut_pb_type->modes[1].interconnect[1].name = (char*) vtr::calloc(
			strlen(lut_pb_type->name) + 11, sizeof(char));
	sprintf(lut_pb_type->modes[1].interconnect[1].name, "direct:%s",
			lut_pb_type->name);

	lut_pb_type->modes[1].interconnect[1].type = DIRECT_INTERC;
	lut_pb_type->modes[1].interconnect[1].input_string = (char*) vtr::calloc(
			strlen(default_name) + strlen(out_port->name) + 4, sizeof(char));
	sprintf(lut_pb_type->modes[1].interconnect[1].input_string, "%s.%s",
			default_name, out_port->name);
	lut_pb_type->modes[1].interconnect[1].output_string = (char*) vtr::calloc(
			strlen(lut_pb_type->name) + strlen(out_port->name)
					+ strlen(in_port->name) + 2, sizeof(char));
	sprintf(lut_pb_type->modes[1].interconnect[1].output_string, "%s.%s",
			lut_pb_type->name, out_port->name);
	lut_pb_type->modes[1].interconnect[1].infer_annotations = true;

	lut_pb_type->modes[1].interconnect[1].parent_mode_index = 1;
	lut_pb_type->modes[1].interconnect[1].parent_mode = &lut_pb_type->modes[1];
	lut_pb_type->modes[1].interconnect[1].interconnect_power =
			(t_interconnect_power*) vtr::calloc(1, sizeof(t_interconnect_power));

	free(default_name);

	free(lut_pb_type->blif_model);
	lut_pb_type->blif_model = nullptr;
	lut_pb_type->model = nullptr;
}

/* populate special memory class */
void ProcessMemoryClass(t_pb_type *mem_pb_type) {
	char *default_name;
	char *input_name, *input_port_name, *output_name, *output_port_name;
	int i, j, i_inter, num_pb;

	if (strcmp(mem_pb_type->name, "memory_slice") != 0) {
		default_name = vtr::strdup("memory_slice");
	} else {
		default_name = vtr::strdup("memory_slice_1bit");
	}

	mem_pb_type->modes = new t_mode[1];
	mem_pb_type->modes[0].name = vtr::strdup(default_name);
	mem_pb_type->modes[0].parent_pb_type = mem_pb_type;
	mem_pb_type->modes[0].index = 0;
	mem_pb_type->modes[0].mode_power = (t_mode_power*) vtr::calloc(1,
			sizeof(t_mode_power));
	num_pb = OPEN;
	for (i = 0; i < mem_pb_type->num_ports; i++) {
		if (mem_pb_type->ports[i].port_class != nullptr
				&& strstr(mem_pb_type->ports[i].port_class, "data")
						== mem_pb_type->ports[i].port_class) {
			if (num_pb == OPEN) {
				num_pb = mem_pb_type->ports[i].num_pins;
			} else if (num_pb != mem_pb_type->ports[i].num_pins) {
				archfpga_throw(get_arch_file_name(), 0,
						"memory %s has inconsistent number of data bits %d and %d\n",
						mem_pb_type->name, num_pb,
						mem_pb_type->ports[i].num_pins);
			}
		}
	}

	mem_pb_type->modes[0].num_pb_type_children = 1;
	mem_pb_type->modes[0].pb_type_children = new t_pb_type[1];
	alloc_and_load_default_child_for_pb_type(mem_pb_type, default_name,
			&mem_pb_type->modes[0].pb_type_children[0]);
	mem_pb_type->modes[0].pb_type_children[0].depth = mem_pb_type->depth + 1;
	mem_pb_type->modes[0].pb_type_children[0].parent_mode =
			&mem_pb_type->modes[0];
	mem_pb_type->modes[0].pb_type_children[0].num_pb = num_pb;

	mem_pb_type->num_modes = 1;

	free(mem_pb_type->blif_model);
	mem_pb_type->blif_model = nullptr;
	mem_pb_type->model = nullptr;

	mem_pb_type->modes[0].num_interconnect = mem_pb_type->num_ports * num_pb;
	mem_pb_type->modes[0].interconnect = new t_interconnect[mem_pb_type->modes[0].num_interconnect];

	for (i = 0; i < mem_pb_type->modes[0].num_interconnect; i++) {
		mem_pb_type->modes[0].interconnect[i].parent_mode_index = 0;
		mem_pb_type->modes[0].interconnect[i].parent_mode =
				&mem_pb_type->modes[0];
	}

	/* Process interconnect */
	i_inter = 0;
	for (i = 0; i < mem_pb_type->num_ports; i++) {
		mem_pb_type->modes[0].interconnect[i_inter].type = DIRECT_INTERC;
		input_port_name = mem_pb_type->ports[i].name;
		output_port_name = mem_pb_type->ports[i].name;

		if (mem_pb_type->ports[i].type == IN_PORT) {
			input_name = mem_pb_type->name;
			output_name = default_name;
		} else {
			input_name = default_name;
			output_name = mem_pb_type->name;
		}

		if (mem_pb_type->ports[i].port_class != nullptr
				&& strstr(mem_pb_type->ports[i].port_class, "data")
						== mem_pb_type->ports[i].port_class) {

			mem_pb_type->modes[0].interconnect[i_inter].name =
					(char*) vtr::calloc(i_inter / 10 + 8, sizeof(char));
			sprintf(mem_pb_type->modes[0].interconnect[i_inter].name,
					"direct%d", i_inter);
			mem_pb_type->modes[0].interconnect[i_inter].infer_annotations = true;

			if (mem_pb_type->ports[i].type == IN_PORT) {
				/* force data pins to be one bit wide and update stats */
				mem_pb_type->modes[0].pb_type_children[0].ports[i].num_pins = 1;
				mem_pb_type->modes[0].pb_type_children[0].num_input_pins -=
						(mem_pb_type->ports[i].num_pins - 1);

				mem_pb_type->modes[0].interconnect[i_inter].input_string =
						(char*) vtr::calloc(
								strlen(input_name) + strlen(input_port_name)
										+ 2, sizeof(char));
				sprintf(
						mem_pb_type->modes[0].interconnect[i_inter].input_string,
						"%s.%s", input_name, input_port_name);
				mem_pb_type->modes[0].interconnect[i_inter].output_string =
						(char*) vtr::calloc(
								strlen(output_name) + strlen(output_port_name)
										+ 2 * (6 + num_pb / 10), sizeof(char));
				sprintf(
						mem_pb_type->modes[0].interconnect[i_inter].output_string,
						"%s[%d:0].%s", output_name, num_pb - 1,
						output_port_name);
			} else {
				/* force data pins to be one bit wide and update stats */
				mem_pb_type->modes[0].pb_type_children[0].ports[i].num_pins = 1;
				mem_pb_type->modes[0].pb_type_children[0].num_output_pins -=
						(mem_pb_type->ports[i].num_pins - 1);

				mem_pb_type->modes[0].interconnect[i_inter].input_string =
						(char*) vtr::calloc(
								strlen(input_name) + strlen(input_port_name)
										+ 2 * (6 + num_pb / 10), sizeof(char));
				sprintf(
						mem_pb_type->modes[0].interconnect[i_inter].input_string,
						"%s[%d:0].%s", input_name, num_pb - 1, input_port_name);
				mem_pb_type->modes[0].interconnect[i_inter].output_string =
						(char*) vtr::calloc(
								strlen(output_name) + strlen(output_port_name)
										+ 2, sizeof(char));
				sprintf(
						mem_pb_type->modes[0].interconnect[i_inter].output_string,
						"%s.%s", output_name, output_port_name);
			}

			/* Allocate interconnect power structures */
			mem_pb_type->modes[0].interconnect[i_inter].interconnect_power =
					(t_interconnect_power*) vtr::calloc(1,
							sizeof(t_interconnect_power));
			i_inter++;
		} else {
			for (j = 0; j < num_pb; j++) {
				/* Anything that is not data must be an input */
				mem_pb_type->modes[0].interconnect[i_inter].name =
						(char*) vtr::calloc(i_inter / 10 + j / 10 + 10,
								sizeof(char));
				sprintf(mem_pb_type->modes[0].interconnect[i_inter].name,
						"direct%d_%d", i_inter, j);
				mem_pb_type->modes[0].interconnect[i_inter].infer_annotations = true;

				if (mem_pb_type->ports[i].type == IN_PORT) {
					mem_pb_type->modes[0].interconnect[i_inter].type =
							DIRECT_INTERC;
					mem_pb_type->modes[0].interconnect[i_inter].input_string =
							(char*) vtr::calloc(
									strlen(input_name) + strlen(input_port_name)
											+ 2, sizeof(char));
					sprintf(
							mem_pb_type->modes[0].interconnect[i_inter].input_string,
							"%s.%s", input_name, input_port_name);
					mem_pb_type->modes[0].interconnect[i_inter].output_string =
							(char*) vtr::calloc(
									strlen(output_name)
											+ strlen(output_port_name)
											+ 2 * (6 + num_pb / 10),
									sizeof(char));
					sprintf(
							mem_pb_type->modes[0].interconnect[i_inter].output_string,
							"%s[%d:%d].%s", output_name, j, j,
							output_port_name);
				} else {
					mem_pb_type->modes[0].interconnect[i_inter].type =
							DIRECT_INTERC;
					mem_pb_type->modes[0].interconnect[i_inter].input_string =
							(char*) vtr::calloc(
									strlen(input_name) + strlen(input_port_name)
											+ 2 * (6 + num_pb / 10),
									sizeof(char));
					sprintf(
							mem_pb_type->modes[0].interconnect[i_inter].input_string,
							"%s[%d:%d].%s", input_name, j, j, input_port_name);
					mem_pb_type->modes[0].interconnect[i_inter].output_string =
							(char*) vtr::calloc(
									strlen(output_name)
											+ strlen(output_port_name) + 2,
									sizeof(char));
					sprintf(
							mem_pb_type->modes[0].interconnect[i_inter].output_string,
							"%s.%s", output_name, output_port_name);

				}

				/* Allocate interconnect power structures */
				mem_pb_type->modes[0].interconnect[i_inter].interconnect_power =
						(t_interconnect_power*) vtr::calloc(1,
								sizeof(t_interconnect_power));
				i_inter++;
			}
		}
	}

	mem_pb_type->modes[0].num_interconnect = i_inter;

	free(default_name);
}

e_power_estimation_method power_method_inherited(
		e_power_estimation_method parent_power_method) {
	switch (parent_power_method) {
	case POWER_METHOD_IGNORE:
	case POWER_METHOD_AUTO_SIZES:
	case POWER_METHOD_SPECIFY_SIZES:
	case POWER_METHOD_TOGGLE_PINS:
		return parent_power_method;
	case POWER_METHOD_C_INTERNAL:
	case POWER_METHOD_ABSOLUTE:
		return POWER_METHOD_IGNORE;
	case POWER_METHOD_UNDEFINED:
		return POWER_METHOD_UNDEFINED;
	case POWER_METHOD_SUM_OF_CHILDREN:
		/* Just revert to the default */
		return POWER_METHOD_AUTO_SIZES;
	default:
		VTR_ASSERT(0);
		return POWER_METHOD_UNDEFINED; // Should never get here, but avoids a compiler warning.
	}
}

void CreateModelLibrary(t_arch *arch) {
	t_model* model_library;

	model_library = new t_model[4];

    //INPAD
	model_library[0].name = vtr::strdup(MODEL_INPUT);
	model_library[0].index = 0;
	model_library[0].inputs = nullptr;
	model_library[0].instances = nullptr;
	model_library[0].next = &model_library[1];
	model_library[0].outputs = new t_model_ports[1];
	model_library[0].outputs->dir = OUT_PORT;
	model_library[0].outputs->name = vtr::strdup("inpad");
	model_library[0].outputs->next = nullptr;
	model_library[0].outputs->size = 1;
	model_library[0].outputs->min_size = 1;
	model_library[0].outputs->index = 0;
	model_library[0].outputs->is_clock = false;

    //OUTPAD
	model_library[1].name = vtr::strdup(MODEL_OUTPUT);
	model_library[1].index = 1;
	model_library[1].inputs = new t_model_ports[1];
	model_library[1].inputs->dir = IN_PORT;
	model_library[1].inputs->name = vtr::strdup("outpad");
	model_library[1].inputs->next = nullptr;
	model_library[1].inputs->size = 1;
	model_library[1].inputs->min_size = 1;
	model_library[1].inputs->index = 0;
	model_library[1].inputs->is_clock = false;
	model_library[1].instances = nullptr;
	model_library[1].next = &model_library[2];
	model_library[1].outputs = nullptr;

    //LATCH
	model_library[2].name = vtr::strdup(MODEL_LATCH);
	model_library[2].index = 2;
	model_library[2].inputs = new t_model_ports[2];

	model_library[2].inputs[0].dir = IN_PORT;
	model_library[2].inputs[0].name = vtr::strdup("D");
	model_library[2].inputs[0].next = &model_library[2].inputs[1];
	model_library[2].inputs[0].size = 1;
	model_library[2].inputs[0].min_size = 1;
	model_library[2].inputs[0].index = 0;
	model_library[2].inputs[0].is_clock = false;
	model_library[2].inputs[0].clock = "clk";

	model_library[2].inputs[1].dir = IN_PORT;
	model_library[2].inputs[1].name = vtr::strdup("clk");
	model_library[2].inputs[1].next = nullptr;
	model_library[2].inputs[1].size = 1;
	model_library[2].inputs[1].min_size = 1;
	model_library[2].inputs[1].index = 0;
	model_library[2].inputs[1].is_clock = true;

	model_library[2].instances = nullptr;
	model_library[2].next = &model_library[3];

	model_library[2].outputs = new t_model_ports[1];
	model_library[2].outputs[0].dir = OUT_PORT;
	model_library[2].outputs[0].name = vtr::strdup("Q");
	model_library[2].outputs[0].next = nullptr;
	model_library[2].outputs[0].size = 1;
	model_library[2].outputs[0].min_size = 1;
	model_library[2].outputs[0].index = 0;
	model_library[2].outputs[0].is_clock = false;
	model_library[2].outputs[0].clock = "clk";

    //NAMES
	model_library[3].name = vtr::strdup(MODEL_NAMES);
	model_library[3].index = 3;

	model_library[3].inputs = new t_model_ports[1];
	model_library[3].inputs[0].dir = IN_PORT;
	model_library[3].inputs[0].name = vtr::strdup("in");
	model_library[3].inputs[0].next = nullptr;
	model_library[3].inputs[0].size = 1;
	model_library[3].inputs[0].min_size = 1;
	model_library[3].inputs[0].index = 0;
	model_library[3].inputs[0].is_clock = false;
	model_library[3].inputs[0].combinational_sink_ports = {"out"};

	model_library[3].instances = nullptr;
	model_library[3].next = nullptr;

	model_library[3].outputs = new t_model_ports[1];
	model_library[3].outputs[0].dir = OUT_PORT;
	model_library[3].outputs[0].name = vtr::strdup("out");
	model_library[3].outputs[0].next = nullptr;
	model_library[3].outputs[0].size = 1;
	model_library[3].outputs[0].min_size = 1;
	model_library[3].outputs[0].index = 0;
	model_library[3].outputs[0].is_clock = false;

	arch->model_library = model_library;
}

void SyncModelsPbTypes(t_arch *arch,
		const t_type_descriptor * Types, const int NumTypes) {
	int i;
	for (i = 0; i < NumTypes; i++) {
		if (Types[i].pb_type != nullptr) {
			SyncModelsPbTypes_rec(arch, Types[i].pb_type);
		}
	}
}

void SyncModelsPbTypes_rec(t_arch *arch,
		t_pb_type * pb_type) {
	int i, j, p;
	t_model *model_match_prim, *cur_model;
	t_model_ports *model_port;
    vtr::t_linked_vptr *old;
	char* blif_model_name = nullptr;

	bool found;

	if (pb_type->blif_model != nullptr) {

		/* get actual name of subckt */
        blif_model_name = pb_type->blif_model;
		if (strstr(blif_model_name, ".subckt ") == blif_model_name) {
			blif_model_name = strchr(blif_model_name, ' ');
            ++blif_model_name; //Advance past space
		}
		if (!blif_model_name) {
			archfpga_throw(get_arch_file_name(), 0,
					"Unknown blif model %s in pb_type %s\n",
					pb_type->blif_model, pb_type->name);
		}

		/* There are two sets of models to consider, the standard library of models and the user defined models */
		if (is_library_model(blif_model_name)) {
			cur_model = arch->model_library;
		} else {
			cur_model = arch->models;
		}

		/* Determine the logical model to use */
		found = false;
		model_match_prim = nullptr;
		while (cur_model && !found) {
			/* blif model always starts with .subckt so need to skip first 8 characters */
			if (strcmp(blif_model_name, cur_model->name) == 0) {
				found = true;
				model_match_prim = cur_model;
			}
			cur_model = cur_model->next;
		}
		if (found != true) {
			archfpga_throw(get_arch_file_name(), 0,
					"No matching model for pb_type %s\n", pb_type->blif_model);
		}

		pb_type->model = model_match_prim;
		old = model_match_prim->pb_types;
		model_match_prim->pb_types = (vtr::t_linked_vptr*) vtr::malloc(
				sizeof(vtr::t_linked_vptr));
		model_match_prim->pb_types->next = old;
		model_match_prim->pb_types->data_vptr = pb_type;

		for (p = 0; p < pb_type->num_ports; p++) {
			found = false;
			/* TODO: Parse error checking - check if INPUT matches INPUT and OUTPUT matches OUTPUT (not yet done) */
			model_port = model_match_prim->inputs;
			while (model_port && !found) {
				if (strcmp(model_port->name, pb_type->ports[p].name) == 0) {
					if (model_port->size < pb_type->ports[p].num_pins) {
						model_port->size = pb_type->ports[p].num_pins;
					}
					if (model_port->min_size > pb_type->ports[p].num_pins
							|| model_port->min_size == -1) {
						model_port->min_size = pb_type->ports[p].num_pins;
					}
					pb_type->ports[p].model_port = model_port;
					if(pb_type->ports[p].type != model_port->dir) {
						archfpga_throw(get_arch_file_name(), 0,
								"Direction for port '%s' on model does not match port direction in pb_type '%s'\n",
								pb_type->ports[p].name, pb_type->name);
					}
					if(pb_type->ports[p].is_clock != model_port->is_clock) {
						archfpga_throw(get_arch_file_name(), 0,
								"Port '%s' on model does not match is_clock in pb_type '%s'\n",
								pb_type->ports[p].name, pb_type->name);
					}
					found = true;
				}
				model_port = model_port->next;
			}
			model_port = model_match_prim->outputs;
			while (model_port && !found) {
				if (strcmp(model_port->name, pb_type->ports[p].name) == 0) {
					if (model_port->size < pb_type->ports[p].num_pins) {
						model_port->size = pb_type->ports[p].num_pins;
					}
					if (model_port->min_size > pb_type->ports[p].num_pins
							|| model_port->min_size == -1) {
						model_port->min_size = pb_type->ports[p].num_pins;
					}

					pb_type->ports[p].model_port = model_port;
					if(pb_type->ports[p].type != model_port->dir) {
						archfpga_throw(get_arch_file_name(), 0,
								"Direction for port '%s' on model does not match port direction in pb_type '%s'\n",
								pb_type->ports[p].name, pb_type->name);
					}
					found = true;
				}
				model_port = model_port->next;
			}
			if (found != true) {
				archfpga_throw(get_arch_file_name(), 0,
						"No matching model port for port %s in pb_type %s\n",
						pb_type->ports[p].name, pb_type->name);
			}
		}
	} else {
		for (i = 0; i < pb_type->num_modes; i++) {
			for (j = 0; j < pb_type->modes[i].num_pb_type_children; j++) {
				SyncModelsPbTypes_rec(arch,
						&(pb_type->modes[i].pb_type_children[j]));
			}
		}
	}
}

void UpdateAndCheckModels(t_arch *arch) {
	t_model * cur_model;
	t_model_ports *port;
	int i, j;
	cur_model = arch->models;
	while (cur_model) {
		if (cur_model->pb_types == nullptr) {
			archfpga_throw(get_arch_file_name(), 0,
					"No pb_type found for model %s\n", cur_model->name);
		}
		port = cur_model->inputs;
		i = 0;
		j = 0;
		while (port) {
			if (port->is_clock) {
				port->index = i;
				i++;
			} else {
				port->index = j;
				j++;
			}
			port = port->next;
		}
		port = cur_model->outputs;
		i = 0;
		while (port) {
			port->index = i;
			i++;
			port = port->next;
		}
		cur_model = cur_model->next;
	}
}

/* Date:July 10th, 2013
 * Author: Daniel Chen
 * Purpose: Attempts to match a clock_name specified in an
 *			timing annotation (Tsetup, Thold, Tc_to_q) with the
 *			clock_name specified in the primitive. Applies
 *			to flipflop/memory right now.
 */
void primitives_annotation_clock_match(
		t_pin_to_pin_annotation *annotation, t_pb_type * parent_pb_type) {

	int i_port;
	bool clock_valid = false; //Determine if annotation's clock is same as primtive's clock

	if (!parent_pb_type || !annotation) {
		archfpga_throw(__FILE__, __LINE__,
				"Annotation_clock check encouters invalid annotation or primitive.\n");
	}

	for (i_port = 0; i_port < parent_pb_type->num_ports; i_port++) {
		if (parent_pb_type->ports[i_port].is_clock) {
			if (strcmp(parent_pb_type->ports[i_port].name, annotation->clock)
					== 0) {
				clock_valid = true;
				break;
			}
		}
	}

	if (!clock_valid) {
		archfpga_throw(get_arch_file_name(), annotation->line_num,
				"Clock '%s' does not match any clock defined in pb_type '%s'.\n",
				annotation->clock, parent_pb_type->name);
	}

}


const t_segment_inf* find_segment(const t_arch* arch, std::string name) {

    for (size_t i = 0; i < (arch->Segments).size(); ++i) {
        const t_segment_inf* seg = &arch->Segments[i];
        if (seg->name == name) {
            return seg;
        }
    }

    return nullptr;
}

bool segment_exists(const t_arch* arch, std::string name) {
    return find_segment(arch, name) != nullptr;
}

bool is_library_model(const char* model_name) {
    if (model_name == std::string(MODEL_NAMES)
        || model_name == std::string(MODEL_LATCH)
        || model_name == std::string(MODEL_INPUT)
        || model_name == std::string(MODEL_OUTPUT)) {
        return true;
    }
    return false;
}

bool is_library_model(const t_model* model) {
    return is_library_model(model->name);
}